| Index | Waupun | Wisconsin | National |
| Average Test Scores | 34% | 41% | 48% |
| Student/Teacher ratio | 12:1 | 14:1 | 16:1 |
| Total public schools | 7 | 1,869 | 79,221 |
| Total private schools | 1 | 872 | 24,874 |
| Total post-secondary schools | n/a | 114 | 7,963 |
| Index | Waupun | Wisconsin | National |
| Completed 8th grade | 78.6% | 89.0% | 84.3% |
| Completed high school | 77.0% | 87.8% | 83.0% |
| Completed some college | 47.8% | 59.7% | 59.4% |
| Completed associate degree | 23.9% | 38.7% | 38.5% |
| Completed bachelors | 14.8% | 28.4% | 30.3% |
| Completed masters | 4.2% | 9.6% | 11.5% |
| Completed professional degree | 2.5% | 2.7% | 3.3% |
| Completed doctorate | 1.4% | 1.1% | 1.3% |
There are a total of 7 public schools, 1 private schools and n/a post-secondary schools in Waupun. Using the proficiency score averages, the average test scores for Waupun, WI schools is 34%. The average student to teacher ratio is 12:1. In Waupun, WI, an average of 78.6% of students have completed 8th grade and an average of 77.0% have completed high school.
| City | Population | Avg. Test Scores | National Avg. |
| Theresa, WI | 1,199 | 70% | 44.8% |
| Rosendale, WI | 906 | 58% | 21.2% |
| Ripon, WI | 7,802 | 55% | 14.4% |
| Green Lake, WI | 873 | 51% | 5.7% |
| Oakfield, WI | 1,082 | 51% | 5.2% |
| Waupun, WI | 11,264 | 34% | 28.8% |
| City | Population | Avg. Test Scores | National Avg. |
| Haysville, KS | 11,260 | 30% | 36.6% |
| Beachwood, NJ | 11,274 | 42% | 13.5% |
| Show Low, AZ | 11,280 | 50% | 3.4% |
| Summerfield, NC | 11,283 | 69% | 43.8% |
| Guttenberg, NJ | 11,284 | 46% | 5.2% |
| Waupun, WI | 11,264 | 34% | 28.8% |
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